http://www.osumicrobiology.org/homepages/artsimovitch/sequences/pVSXXX.seq
|
name |
description |
AbR |
Seq |
|
pVS4 |
recreating 312 to attain high induction levels: XhoI to XbaI fragment of cloned between the same sites of pIA299 |
Amp |
|
|
pVS5
|
MfeI to ApaI fragment from pIA452 cloned into pIA423 |
Amp |
|
|
pVS6
|
XbaI-HindIII fragment from pIA446 cloned into LITMUS28 |
Amp |
|
|
pVS7
|
BglII-XbaI fragment from pVS6 cloned into the same sites of pIA462 |
Tet |
|
|
pVS8 |
EcoRIQ111 mutant amplified from pEQ111m with oligos 159 and 160 and cloned between NdeI and SapI sites of pTYB1 |
Amp |
|
|
pVS9 |
EcoRIQ111 mutant amplified from pEQ111m with oligos 159 and 160 and cloned between NdeI and XhoI sites of pET33 |
Kn |
|
|
pVS10
|
E. coli RNAP overexpression vector: all subunits = a,β,β, and w. His6 tag at the C-terminus of β |
Amp |
|
|
pVS11
|
E.coli dksA in pTYB12, cloned between BsmI and PstI, has an extra A at the N-terminus after cleavage |
Amp |
|
|
pVS12
|
ECOLI rfaH in pTYB1, cloned between NdeI and SapI, the C-terminal L is replaced by A, to improve intein cleavage |
Amp |
|
|
pVS13
|
VCHOL rfaH in pTYB1, cloned between NdeI and SapI, the C-terminal T is replaced by A, to improve intein cleavage |
Amp |
|
|
pVS14
|
β' SI3 deletion in pVS10 - recloned BsmI-HindIII fragment from pIA301 |
Amp |
|
|
pVS15
|
β ' T790L in pIA299 ; SDM with oligos 327+328 |
Amp |
|
|
pVS16
|
β ' T790A in pIA299; SDM with oligos 325+326 |
Amp |
|
|
pVS17
|
E.coli rpoH cloned between Mva1269I and NotI of pTYB12 |
Amp |
|
|
pVS18
|
E.coli dksA Asp71Asn,Asp74Asn in pVS11, SDM with oligos 408+409 |
Amp |
|
|
pVS19
|
E.coli dksA Asp71Ala,Asp74Ala in pVS11, SDM with oligos 410+411 |
Amp |
|
|
pVS20
|
RfaH domain1/N-term PCR cloned into NdeI-SapI sites of pTYB1 (SapI is gone in the final clone) |
Amp |
|
|
pVS21
|
RfaH domain2/C-term PCR cloned into NdeI-SapI sites of pTYB1 (SapI is gone in the final clone) |
Amp |
|
|
pVS25
|
T. thermophilus greA: PCR with oligos 513+514 cloned between PstI and BsmI of pTYB12 |
Amp |
|
|
pVS26
|
T. thermophilus gfhI: PCR with oligos 511+512 cloned between SalI and BsmI of pTYB12 |
Amp |
|
|
pVS28
|
DbpA in pTYB12 |
Amp |
|
|
pVS29
|
SrmB in pTYB12 |
Amp |
|
|
pVS35
|
β ' Y457H: SbfI to BsmI fragment from pIA521 recloned into pVS10 |
Amp |
|
|
pVS36
|
β ' N458S: SbfI to BsmI fragment from pIA521 recloned into pVS10 |
Amp |
|
|
pVS40
|
T7A1 - consensus ops -scrambled ops in pIA416 |
Amp |
|
|
pVS46
|
T7A1 - scrambled ops in pIA416 |
Amp |
|
|
pVS47
|
YacL in pTYB12: PCR 649-648 cloned between BsmI and SalI sites |
Amp |
|
|
pVS48
|
β F773V from pIA387 cloned between BsmI and HindIII sites of pVS10; silent SnaBI site |
Amp |
|
|
pVS49
|
β IS774 (silent EarI site) from pIA388 cloned between BsmI and HindIII sites of pVS10 |
Amp |
|
|
pVS50
|
β 672,673DD in pVS10 |
Amp |
|
|
pVS51
|
deletions of the β C-terminal CC residues 665-671and 674-680 in pVS10 |
Amp |
|
|
pVS53
|
T7A1 - consensus ops - consensus ops in pIA416 |
Amp |
|
|
pVS54
|
T7A1 - scrambled ops - scrambled ops in pIA416 |
Amp |
|
|
pVS55
|
T7A1 - scrambled ops - consensus ops in pIA416
|
Amp |
|
|
pVS56
|
RfaH E. coli + HMK (C-term): genomic PCR 58-746 cloned into NdeI and SapI of pTYB1 |
Amp |
|
|
pVS57
|
α-His6β (D226-350)- β: moved NcoI-SbfI fragment from pIA319 (rifS) into pIA679 |
Amp |
|
|
pVS58
|
T. thermophilus NusG cloned between NdeI and NotI sites of pTYB12;genomic PCR with oligos 392+742 |
Amp |
|
|
pVS60
|
T. thermophilus RpoD in pTYB12 714+715 |
Amp |
|
|
pVS61
|
RfaH R23A in pIA432; silent XhoI site |
Kn |
|
|
pVS62
|
RfaH R73D in pIA432; SacII site disappears (SDM with 930+931) |
Kn |
|
|
pVS63
|
MTUBE RbpA in pTYB12: genomic PCR with 894+895 cloned into BsmI and PstI of pTYB12 |
Amp |
|
|
pVS66
|
RfaH R73A in pIA432; SacII site disappears |
Kn |
|
|
pVS67
|
RfaH M140D in pIA432; silent BglII site |
Kn |
|
|
pVS68
|
RfaH L143Din pIA432; no sites |
Kn |
|
|
pVS69
|
ActX in pTYB12: genomic PCR w/883+884 cloned into BsmI and PstI of pTYB12 |
Amp |
|
|
pVS101
|
E.coli crl in pTYB12 genomic PCR with 988+989 cloned into Mva1269I and PstI |
Amp |
|
|
pVS103
|
RfaH pIA432::H152I (PCR 92+1074) |
Kn |
|
|
pVS104
|
RfaH pIA432::A122P (1075+1076) |
Kn |
|
|
pVS109
|
GreB T141E in pIA576; SDM with oligos 1135+1136 |
Kn |
|
|
pVS110 |
GreB S122E in pIA576; SDM with oligos 1133+1134 |
Kn |
|
|
pVS111 |
GreB M124E in pIA576; SDM with oligos 1131+1132 |
Kn |
|
|
pVS112 |
GreB I118E in pIA576; SDM with oligos 1137+1138 |
Kn |